PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT57682.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | MYB | ||||||||
Protein Properties | Length: 339aa MW: 38672.8 Da PI: 6.2801 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.2 | 3.4e-17 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l+++++ +G g+W+ ++++ g+ R++k+c++rw +yl PHT57682.1 14 RGLWSPEEDEKLIRYITSHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61 788*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 53.3 | 6.2e-17 | 67 | 111 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rgr+T+eE++l++ ++ G++ W+ Ia++++ gRt++++k++w+++ PHT57682.1 67 RGRFTPEEEKLIISLHGAVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111 89********************.*********.************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 339 aa Download sequence |
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT SHGYGCWSEV PEKAGLQRCG KSCRLRWINY 60 LRPDIRRGRF TPEEEKLIIS LHGAVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKLKKPS 120 KPSANTTSIT DHHHQQSHQR SQLVNYNTIT SQQDIFFTQD LGTKSQVLLQ DSTLFNSPSQ 180 LFFFDSGSLD SMTNAIINDA TNRSTTTNNA SLFQETSTLN SEFCWQVDQQ QQQQLQVQTS 240 SYAIGMDSNY LPPLIESMVP PLEIPRNNNN NNNNIMVEGQ ENNNQLDEWS SQVDTQQCCP 300 SYLFWDQENG SIGGDHEINI DPTTSNNMGQ ILSSFPSSL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63910.1 | 1e-80 | MYB family protein |