PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57664.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

AP2

Protein Properties

Length: 719aa MW: 80917 Da PI: 9.4668

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57664.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	26.7	1.4e-08	82	128	5	55
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 G+ k +gr+vA+I dp + k++++g f+t eeA +a+ + ++e+ PHT57664.1 82 GIKKQK-NGRYVARITDPI----KhKQVPVGVFDTIEEASQAYLSKKSEFEN 128 777666.8*******72....46****************988877765 PP
2	AP2	26.4	1.8e-08	160	199	3	45
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAaka 45 + G +++kk+gr+ + I+ p + k++slg+f+taeeA +a PHT57664.1 160 IIGAYRRKKTGRYYSKIMNPI----TkKNISLGTFDTAEEASRA 199 66779*********99972....36*************98 PP
3	AP2	22.8	2.3e-07	413	452	5	48
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaia 48 G+r+ k +gr++A I dp + k + lg+f+t eeA +a+ PHT57664.1 413 GIRRQK-SGRYAAVITDPI----ThKEVCLGTFDTIEEASQAYFS 452 999888.8*******82....47***************965 PP
4	AP2	32.5	2.1e-10	509	549	2	45
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAaka 45 ++ GV+ k+ g++ +eIrdp + ++++lg+f+taeeA a PHT57664.1 509 HIIGVYKSKSLGKFTSEIRDPI----TkRTIWLGTFDTAEEASHA 549 789***************72....36************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 719 aa Download sequence
MAMKTDGIAL FTDEEEETCY KKQKTRKVSE IFVDKVNSTN HSCLMSIGKK TGLMTKVRGA 60 ESCDECNVST CCDSKAKISL TGIKKQKNGR YVARITDPIK HKQVPVGVFD TIEEASQAYL 120 SKKSEFENKW KKNFEQPESP SVSASGTDRR IDSRERTTRI IGAYRRKKTG RYYSKIMNPI 180 TKKNISLGTF DTAEEASRAF QSKKLEFQKL VDVKQEQCAN KHSRSNQDGT TLSGGLVNVK 240 RERENLICHE RFQHGGEAFR VCQSKNKQAF SCNTTTSWNT KAKRSFVGIK RQMDGRYAAV 300 ITDRVKHRKV WFDTFDTIEE ASQAYSSKKS EFEELSQQGN KENKSMKNCD QIQQPESSSV 360 EGRREKRIDS HGKEAGSSKA RSCLMTNVCS GESPDERSIT TNCDPKAKMS LIGIRRQKSG 420 RYAAVITDPI THKEVCLGTF DTIEEASQAY FSKKSEFDKL RQQGKTENKL KKNCDPIQQP 480 ESSSVMASLD TAGGSGRGKR IESHKRTTHI IGVYKSKSLG KFTSEIRDPI TKRTIWLGTF 540 DTAEEASHAF QSKKLEFQKL VQAKQKQCTH KQTHSKEDRK SEKSVHAKKE HENLNCGLES 600 VGGPRIDFPM SNTSNGGTDQ RINPHETGIA EDTFHACLSE KFYSQSSKEV ELQSNMSTDS 660 CAGKNQQGQE DDDKDLWMGK WVQLGDRTVM FSLKLGLPII DNYGSLLGEF SSLDDLSII

Sequence ? help Back to Top

Protein Sequence Length: 719 aa Download sequence

MAMKTDGIAL FTDEEEETCY KKQKTRKVSE IFVDKVNSTN HSCLMSIGKK TGLMTKVRGA  60
ESCDECNVST CCDSKAKISL TGIKKQKNGR YVARITDPIK HKQVPVGVFD TIEEASQAYL  120
SKKSEFENKW KKNFEQPESP SVSASGTDRR IDSRERTTRI IGAYRRKKTG RYYSKIMNPI  180
TKKNISLGTF DTAEEASRAF QSKKLEFQKL VDVKQEQCAN KHSRSNQDGT TLSGGLVNVK  240
RERENLICHE RFQHGGEAFR VCQSKNKQAF SCNTTTSWNT KAKRSFVGIK RQMDGRYAAV  300
ITDRVKHRKV WFDTFDTIEE ASQAYSSKKS EFEELSQQGN KENKSMKNCD QIQQPESSSV  360
EGRREKRIDS HGKEAGSSKA RSCLMTNVCS GESPDERSIT TNCDPKAKMS LIGIRRQKSG  420
RYAAVITDPI THKEVCLGTF DTIEEASQAY FSKKSEFDKL RQQGKTENKL KKNCDPIQQP  480
ESSSVMASLD TAGGSGRGKR IESHKRTTHI IGVYKSKSLG KFTSEIRDPI TKRTIWLGTF  540
DTAEEASHAF QSKKLEFQKL VQAKQKQCTH KQTHSKEDRK SEKSVHAKKE HENLNCGLES  600
VGGPRIDFPM SNTSNGGTDQ RINPHETGIA EDTFHACLSE KFYSQSSKEV ELQSNMSTDS  660
CAGKNQQGQE DDDKDLWMGK WVQLGDRTVM FSLKLGLPII DNYGSLLGEF SSLDDLSII

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68550.1	3e-11	ERF family protein