PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57663.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

AP2

Protein Properties

Length: 445aa MW: 51192.5 Da PI: 10.1912

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57663.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	27.7	6.9e-09	18	55	5	46
AP2 5 GVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaa 46 G++ + k+gr++A d rk+ +lg+f+t eeA +a+ PHT57663.1 18 GIW-RQKNGRYAAVFTD----RiTRKKLWLGTFDTIEEASQAY 55 886.5559****555....2235***************9 PP
2	AP2	24.9	5.1e-08	57	87	19	56
AP2 19 IrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 Ir+ kr++lg+f+t eeA +a+ + +++le+e PHT57663.1 57 IRH-------KRVWLGTFDTVEEASQAYFNKKLELENE 87 444.......*************************986 PP
3	AP2	24.1	9.2e-08	137	181	7	55
AP2 7 rwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 r + ++gr+ A I d + +rk+++lg+f+t eeA +a+ + +l++ PHT57663.1 137 R-RQQNGRYGAVITD----QiRRKQVRLGTFDTVEEASQAYFSKKSELKN 181 5.5559*******....4456****************998888876 PP
4	AP2	30	1.3e-09	207	252	5	54
AP2 5 GVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 G+r++k +gr+ A I dp + k ++lg+f+t e+A +a+ + + ++e PHT57663.1 207 GIRRRK-SGRYSAKITDPI----KhKEVYLGTFDTTEQASQAYFNKKSEFE 252 9999.7*****72....46****************98877766 PP
5	AP2	23.8	1.1e-07	302	339	5	45
AP2 5 GVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAaka 45 G + k+ gr+ +eI + + k+++lg+fgtaeeA a PHT57663.1 302 GAYKSKTAGRYTSEIIHsI-----TkKKIWLGTFGTAEEASHA 339 55788999*****9933.....35************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 445 aa Download sequence
MRGVTYADEC NTKRSLTGIW RQKNGRYAAV FTDRITRKKL WLGTFDTIEE ASQAYRIRHK 60 RVWLGTFDTV EEASQAYFNK KLELENEILN QQGNHIQQSL ADVETFDTAS VGTESTNERN 120 VTASSLPTAK RCLRTIRRQQ NGRYGAVITD QIRRKQVRLG TFDTVEEASQ AYFSKKSELK 180 NEKLNQQCTN MHTRSEQGPK DEISLIGIRR RKSGRYSAKI TDPIKHKEVY LGTFDTTEQA 240 SQAYFNKKSE FEKLRQQRQT ENIRKRNCDQ IQQPVASLDT AASARARHKR TDSHITTPHM 300 IGAYKSKTAG RYTSEIIHSI TKKKIWLGTF GTAEEASHAF QSKKLEFQKL VKAKKQHCTQ 360 SKPEKLVNFK QGTAEETFHV NQSKKFDLQS SKDVELQSDI PTDSSAGKKQ EEQEDDEDLW 420 MGKWVQLPGD REVKFSLKLG LPNHR

Sequence ? help Back to Top

Protein Sequence Length: 445 aa Download sequence

MRGVTYADEC NTKRSLTGIW RQKNGRYAAV FTDRITRKKL WLGTFDTIEE ASQAYRIRHK  60
RVWLGTFDTV EEASQAYFNK KLELENEILN QQGNHIQQSL ADVETFDTAS VGTESTNERN  120
VTASSLPTAK RCLRTIRRQQ NGRYGAVITD QIRRKQVRLG TFDTVEEASQ AYFSKKSELK  180
NEKLNQQCTN MHTRSEQGPK DEISLIGIRR RKSGRYSAKI TDPIKHKEVY LGTFDTTEQA  240
SQAYFNKKSE FEKLRQQRQT ENIRKRNCDQ IQQPVASLDT AASARARHKR TDSHITTPHM  300
IGAYKSKTAG RYTSEIIHSI TKKKIWLGTF GTAEEASHAF QSKKLEFQKL VKAKKQHCTQ  360
SKPEKLVNFK QGTAEETFHV NQSKKFDLQS SKDVELQSDI PTDSSAGKKQ EEQEDDEDLW  420
MGKWVQLPGD REVKFSLKLG LPNHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68550.1	6e-11	ERF family protein