PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT57071.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HD-ZIP

Protein Properties

Length: 335aa MW: 38386.9 Da PI: 6.9595

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT57071.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	57.1	3e-18	125	178	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k+++++ eq+++Le+ Fe+ +++ e++ +LA+ lgL+ rq+ +WFqNrRa++k PHT57071.1 125 KKRRLNMEQVKALERSFEMANKLEPERKIQLARALGLQPRQIAIWFQNRRARWK 178 456899***********************************************9 PP
2	HD-ZIP_I/II	132.1	2.1e-42	124	215	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqvk+LE+sFe+ +kLeperK +lar+Lglqprq+a+WFqnrRAR+ktkqlEkdye Lkr+yd+lk++n++L+++++eL++el+ PHT57071.1 124 EKKRRLNMEQVKALERSFEMANKLEPERKIQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYEILKRHYDSLKADNDALKAQNKELHSELQ 215 69***************************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MGNLKWNLRN SINLERFVKL EGMLRKFANT RGIMAFVPST PDISLNFQPL HQDNNNNHHL 60 PSTSPKLFPS PCLPHQDFNH GLPSMLMRRS MSFSGVERCD NHQDLRVDDN EMSDDDGSSQ 120 LLGEKKRRLN MEQVKALERS FEMANKLEPE RKIQLARALG LQPRQIAIWF QNRRARWKTK 180 QLEKDYEILK RHYDSLKADN DALKAQNKEL HSELQLLNVK NRESSGGGGT PIMINLNKEN 240 EGSWSNNGSD DNNSIDVNLG TATTSGDSPF YSKNVFPETG PTTLAHFLQS SSRPDLSHCH 300 KIDPTVQDDQ GFCNMFTPVD DQTNFWPWPE QQHFN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	173	181	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G15150.1	1e-66	HD-ZIP family protein