PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56905.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HSF
Protein Properties Length: 308aa    MW: 34106 Da    PI: 4.8642
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56905.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind118.15.1e-37101012102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl k+y++++d +++++isw+eng++fvv+++ efak++LpkyFkh+nf+SFvRQLn+YgF+k+  ++         weF++++Fk+g+kell+ i+
    PHT56905.1  10 FLLKTYQLVDDVSTDDVISWNENGTTFVVWKTAEFAKDLLPKYFKHNNFSSFVRQLNTYGFRKIVPDK---------WEFANENFKRGQKELLTAIR 97 
                   9****************************************************************999.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k+
    PHT56905.1  98 RRKT 101
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MSQRTAPAPF LLKTYQLVDD VSTDDVISWN ENGTTFVVWK TAEFAKDLLP KYFKHNNFSS  60
FVRQLNTYGF RKIVPDKWEF ANENFKRGQK ELLTAIRRRK TVTSAPAIGK SVAGGTSASP  120
DNSGDEIGSS STSSPDSKNP GSVETPGKLS AQFTDLSDEN EKLKKDNQML SSELIQAKKQ  180
CDELVAFLSQ YVKVAPDMIN RIMSQGTPSG TSLEELVKEV GGVKDLEEQG REQGSYNDDD  240
DEEADDDDEK GDTLKLFGVL LKEKKKKRGL DDNNDFCGAR GKMMKTVDYN APWMKMSSAA  300
GESSKVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.19e-86HSF family protein