PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56896.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 220aa    MW: 24524.2 Da    PI: 9.1381
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56896.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.41.3e-08125165954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +Av+Y+k L
  PHT56896.1 125 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAVHYVKFL 165
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MDLQDIAQSL ELGFSSSNIE MIPLQPPVHN SNYLMTSPPS NFSFMGNPIE EPAVPILSSI  60
DEIIASTHGS GNEYSCLQKR NSMEVMREMI FRMAMMQPIH IDPESVKPPK RKNVKISKDP  120
QSVAARHRRE RISERIRILQ RLVPGGTKMD TASMLDEAVH YVKFLKKQLQ SLEQAAVNNR  180
PMGSGFSTAM SSPGPMNYNS SSIRSCQTHP SMNSSAQMLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.13e-43bHLH family protein