PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT56854.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRF | ||||||||
Protein Properties | Length: 745aa MW: 81146.4 Da PI: 6.3962 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77 | 1.9e-24 | 379 | 423 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e+ PHT56854.1 379 DPEPGRCRRTDGKKWRCSREAVPDQKYCERHINRGRHRSRKHVES 423 79****************************************986 PP | |||||||
2 | QLQ | 61.6 | 2.1e-21 | 310 | 346 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yK+L+an+P+P++Ll +++k PHT56854.1 310 GPFTPSQWMELEHQALIYKHLVANVPIPHQLLIPLKK 346 59*******************************9975 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 745 aa Download sequence |
MIKFEHDRQE VVIHGEGDLF ACEDSPLSLI EASNVEETFV YQIFDTVPVN RILEWQFIRG 60 PQLSSASIMM VSELWKYGFE PEKGLGASLH GIVCPICPSE NAGTFGLGFK PTTEDLKKAK 120 ERKKETWSLP RPMPLLSESF VKSGVTKHVE FEVELVDDFQ NLFIDVDMVE AGEVTMEAVT 180 VQESETTSNS NGSGQLRKER SGPRDDNTWR SCKVTKPADD FSTPANLFMR SASPNDGRGH 240 STMLSFSFPK SEEIPFLCTT NNVPAQDSAR TLAFPLFDSG SHYSRAASAY ASASGGSNES 300 SCGPFARFRG PFTPSQWMEL EHQALIYKHL VANVPIPHQL LIPLKKSLNP YAFSGLSAGP 360 YASNWGGVTF HLGFAGNTDP EPGRCRRTDG KKWRCSREAV PDQKYCERHI NRGRHRSRKH 420 VESQNGHVVS GSTTSKVASV APSSSASVIP SSGTSNNLGA VQHQFNNLQP SAANPSTEQL 480 VNRMKDHKGV NMISPTIGLK PKDVAISVQK QHNGFELSSQ TDFGLVSSDS LLNPSQRNSF 540 VNPKNANAFL DFNDQEQSEQ HPVHHFIDGW NKEQSSRASA SWPDQLNSDW TQLSMSIPMA 600 ASDFASSSSP RQEKLTLSPL RLSRDLDPIQ MGLGVTNSYD AGMQKTANWV PVSWENTLGG 660 PLGEALNNTT GSAGDGKSAS AFNLATEVWN NSPPFGSSPT GVLQKSTFVS LSNSSSGGSP 720 RGDSKKVHEG IGMCDEVIGS TLAFP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22840.1 | 1e-96 | GRF family protein |