PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56720.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 299aa    MW: 33275.6 Da    PI: 7.9893
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56720.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH43.94.3e-14114161355
                 HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 + h  +Er+RR+r+ ++f  L +l+P++     kKl+Ka++L  A++YIk+L+
  PHT56720.1 114 QDHVLAERKRRERLTQRFIALSTLIPNL-----KKLDKATVLGDAIKYIKQLE 161
                 56999***********************.....9*****************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 299 aa     Download sequence    
MDTAWWSEME TPFDELPFNK AFSTFSPPPP SSIISNNYSY SHSGSAKNHL ENMKVKSEVP  60
SGTTINFSSS SSMETDDFGD SQSLIQALGF TFGAADTNTT TQKKSYSRTS LQAQDHVLAE  120
RKRRERLTQR FIALSTLIPN LKKLDKATVL GDAIKYIKQL EEQVKTLEEK TKKCKEVEQV  180
VAVKRPRLAS SCDDSSSSGE ISSVSTDRSL PDIEVRTSDG NILIRIYCKK QTGIMKEIFN  240
EVDKLHLSVV SCSVMPFGYN TSHMTIIAQM DHKLSVTPNH IANRIRAVIM KEEASSGTT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1120125ERKRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.16e-38bHLH family protein