PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56589.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ZF-HD
Protein Properties Length: 305aa    MW: 34677.4 Da    PI: 8.1319
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56589.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer106.12.1e-3397154260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  +++rYkeClkNhAa++Ggh++DGCgEfmps geegt++ lkCaAC+CHRnFHR+e+++e
   PHT56589.1  97 STIRYKECLKNHAANMGGHVLDGCGEFMPS-GEEGTPEYLKCAACDCHRNFHRKETDDE 154
                  579**************************9.999*********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 305 aa     Download sequence    
MEHRGQEKDM GMPNPMGYNH PSHLNQQESS YSPANKFPTA PIDDDRRTNE QIIPGNTIIS  60
PNQTLDQHNL TQTSDPDPNP NPVRQVSTSS ASERNTSTIR YKECLKNHAA NMGGHVLDGC  120
GEFMPSGEEG TPEYLKCAAC DCHRNFHRKE TDDESQTPGM HRNNSINHRI HTQTPPSLPA  180
APTHHHHHHK YSHSYPRGHM APVMMSFGGN SGVPAESSSE DLNMFRDGQG IIQPCNFSAS  240
KKRFRTKFSQ QQKDRMQEFA EKLGWRIQKQ DEQEVQQFCN EVGVKRQVFK VWMHNSKQAI  300
KKKQT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G18350.18e-70ZF-HD family protein