PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT56503.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

WOX

Protein Properties

Length: 320aa MW: 36263.8 Da PI: 6.7642

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT56503.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	62.7	5.3e-20	43	104	2	57
T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++R+t+t++q+++L++l+++ r p+ae+++++++kl +++ ++V++WFqN++a+e++ PHT56503.1 43 STRWTPTSDQIRILKDLYYNngVRSPTAEQIQRISAKLrqygKIEGKNVFYWFQNHKARERQ 104 58***************8678***********************************97 PP
2	Wus_type_Homeobox	113.8	9e-37	42	106	2	65
Wus_type_Homeobox 2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 ++tRWtPt++Qi+iL++ly+ +G+r+P++e+iqri+a+L++yGkie+kNVfyWFQN+kaRerqk+ PHT56503.1 42 SSTRWTPTSDQIRILKDLYYnNGVRSPTAEQIQRISAKLRQYGKIEGKNVFYWFQNHKARERQKK 106 789*************9779***************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MEHQHQQQNQ QHYLHQQHIE DGVGSKNNNN SSGSNSFMCR QSSTRWTPTS DQIRILKDLY 60 YNNGVRSPTA EQIQRISAKL RQYGKIEGKN VFYWFQNHKA RERQKKRLIA AASVNDNNIN 120 INNTNIPGPM QMIPHLWRSV DEHKYNNTTN PGVHCPSASS HGVLTVGQTG NYGYGTLAME 180 KSFRDCSISP PGGSSNGSSM NHHQNFTWVG VDPYMTCPTT YPFLEKSSIN KHYEEETLEE 240 EEELQEEENY HPGLETLPLF PMHEENMISS LCSSSIKHHE SSGGGGGWYH HTNSDGYHNN 300 NLAALELSLN SFIGRSPNFP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17950.1	2e-38	WOX family protein