PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT56115.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HSF
Protein Properties Length: 412aa    MW: 47127 Da    PI: 5.1679
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT56115.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind98.37.3e-31731652103
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   F+ k+ye+l d ++++lisw++ng+sf+++d+++fa +vLp++F+h+n++SF+ QLn YgFkkv+ ++          eF+h++F++gk + l+kik
    PHT56115.1  73 FVLKIYEMLADIQFESLISWTNNGTSFIIHDNHRFAVEVLPRFFRHNNLSSFICQLNCYGFKKVNWDK---------FEFRHEWFQRGKGQWLKKIK 160
                   9****************************************************************999.........67****************** PP

                   XXXXX CS
  HSF_DNA-bind  99 rkkse 103
                   rk s+
    PHT56115.1 161 RKPSK 165
                   **986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 412 aa     Download sequence    
MTEIDNIVEM LGEGYEGLED VHIDISMLEY DDDDKQCNEV IHGNAVTATA TARELLFSSS  60
SNRRNSQKQG CPFVLKIYEM LADIQFESLI SWTNNGTSFI IHDNHRFAVE VLPRFFRHNN  120
LSSFICQLNC YGFKKVNWDK FEFRHEWFQR GKGQWLKKIK RKPSKSQMNE QLTDRQGIDE  180
TAAFTIGKEI EEIRAEQAAM REEIIVLQRQ LDMLEKEMED INQAGDNLSS KKAKICMLLF  240
NTLLGQAQDG EVEDGVETRG KGNRGEKRKV QVEGELEGDN EGSKKIAGAA DFKSDSYLGK  300
MLMDEMNLNN LAHEQPDNFL ESEELAGSST FWIDYVEKMD HNTIFSGAGP AFSQTRKWQI  360
PVACNGHQED AGRRLCFHIH VLVSLIDCDH RKSVLASLDF WSSKKKQDHK PP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1156163LKKIKRKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03720.14e-31HSF family protein