PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55983.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Dof

Protein Properties

Length: 388aa MW: 42328 Da PI: 8.3286

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55983.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	123.7	6.2e-39	62	120	4	62
zf-Dof 4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +lkcprCds+ntkfCyynnyslsqPr+fCkaC+ryWt+GG+lrnvPvGgg+rknk+ + PHT55983.1 62 PHLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRIK 120 5789****************************************************875 PP

Sequence ? help Back to Top
Protein Sequence Length: 388 aa Download sequence
MVVGECEKKK MALIPSSTTN EIWPQIDEKN NLMMASNGSS SSNTRDMEKP IPDPSQQQPP 60 PPHLKCPRCD SSNTKFCYYN NYSLSQPRHF CKACKRYWTR GGTLRNVPVG GGCRKNKRIK 120 RPSTNSSSSS SCTAHDIITT STPNISTLNP SHHVAHNSID ISSTNSINPL FYGLTSERSD 180 LNIPFARLFN SRVSSHATVG EGQVYSLTDS IPGLMDRRMG LGFSNSSVGG VNIMGENNNY 240 GHGGFNPIKQ IQDVVMTSNC TTSSTSLLST YPNMFGSSSS TSTMASLIAS SLQQQKFMSN 300 INGNNFHNLA PNYEELQMSR GDNNNNNNNS NVHEGGGNGI TMLKAEKMDL SNHQIHEQII 360 NSSDPSLSWN GAWLDPSNMG SNSVPSLI

Sequence ? help Back to Top

Protein Sequence Length: 388 aa Download sequence

MVVGECEKKK MALIPSSTTN EIWPQIDEKN NLMMASNGSS SSNTRDMEKP IPDPSQQQPP  60
PPHLKCPRCD SSNTKFCYYN NYSLSQPRHF CKACKRYWTR GGTLRNVPVG GGCRKNKRIK  120
RPSTNSSSSS SCTAHDIITT STPNISTLNP SHHVAHNSID ISSTNSINPL FYGLTSERSD  180
LNIPFARLFN SRVSSHATVG EGQVYSLTDS IPGLMDRRMG LGFSNSSVGG VNIMGENNNY  240
GHGGFNPIKQ IQDVVMTSNC TTSSTSLLST YPNMFGSSSS TSTMASLIAS SLQQQKFMSN  300
INGNNFHNLA PNYEELQMSR GDNNNNNNNS NVHEGGGNGI TMLKAEKMDL SNHQIHEQII  360
NSSDPSLSWN GAWLDPSNMG SNSVPSLI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28310.2	6e-37	Dof family protein