PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55966.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 166aa    MW: 18390.9 Da    PI: 6.0005
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55966.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP245.61.8e-142373256
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
                +y GVr      r++AeIrdp++   +k+++lg+f+t e+Aa a++aa + ++g+
  PHT55966.1 23 HYNGVRKIQ-GRRYAAEIRDPCK---KKNVWLGTFDTREQAATAYDAAVRLFHGH 73
                5889*8665.677*******853...6*********************9998886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 166 aa     Download sequence    
MEQMKNGDAT VMATTMILHI EVHYNGVRKI QGRRYAAEIR DPCKKKNVWL GTFDTREQAA  60
TAYDAAVRLF HGHKAVTNFL PVIDDNIQSV KDFLEKLHER SAIRPSSQAG NNAVRVSLPN  120
ENPVCCLETV DLIGSWSGVQ DDQLPATIVE ETINLDLISL APSGSM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.11e-23ERF family protein