PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55851.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family BES1
Protein Properties Length: 326aa    MW: 35176.2 Da    PI: 8.2041
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55851.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822210.16e-6521451148
      DUF822   1 ggsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspesslqsslk 99 
                 ++++r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g s s+sp+ss+q    
  PHT55851.1   2 TSGTRLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCKEAGWIVEEDGTTYRKGCKPVERMDIIGGSVSVSPCSSYQ---- 96 
                 5899*******************************************************************************************.... PP

      DUF822 100 ssalaspvesysaspksssfpspssldsislasa....asllpvlsvlslvss 148
                      sp  sy++sp+sss+psp+s+  + + ++    +sl+p+l++ls+ ss
  PHT55851.1  97 ----LSPGVSYNPSPASSSIPSPVSSHYVANVQNnsdpNSLIPWLKNLSSGSS 145
                 ....677777777777777777777665544333456699*******998443 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MTSGTRLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCKEAG  60
WIVEEDGTTY RKGCKPVERM DIIGGSVSVS PCSSYQLSPG VSYNPSPASS SIPSPVSSHY  120
VANVQNNSDP NSLIPWLKNL SSGSSPSSSN FPHNLCIPGG SISAPVTPPS SSPTARTPRM  180
NDNWDNPKAN SSWIQQHYPF LPSSTPPSPG RQTPPDSGWL SGVQTPQDGP SSPTFSLVSS  240
NPFGFKEPLS NGGSRMWTPG QSGTCSPAVG ACMDQTADVP MSDVISAEFA FGSNMKGVVK  300
PWEGERIHEE CISDDLELTL GNSSTR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.11e-104BES1 family protein