PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55783.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 306aa    MW: 34320 Da    PI: 5.4647
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55783.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.81.4e-3077135259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers+ dp+++++tY+ eHnh+
  PHT55783.1  77 SDSWAWRKYGQKPIKGSPYPRGYYRCSSSkGCPARKQVERSRADPNMLVVTYSCEHNHP 135
                 69*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MEGRFNNFFV SEQDDSENSP ENSSDSPRSA MFNDNKMITS TSSPKRSRRS IEKTVVSVPI  60
KEVEGSKMKG EISMPPSDSW AWRKYGQKPI KGSPYPRGYY RCSSSKGCPA RKQVERSRAD  120
PNMLVVTYSC EHNHPWPASR SNQHNHRTIT PTSCTNNNTK TKTKTIASLT ASPATTTLIT  180
TTSDIPVLHY EQEKATTDFA VRPSEPNSDE KFVNLGESSL INAEFGWFSD LVECNSTTIL  240
ESPILTQVEV NDFDMSSTLT MQEEDVSLFA DLGELPECSR VFGRGMMERD EERDRHNLTP  300
WCGTTG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58710.29e-55WRKY family protein