PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55175.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 298aa MW: 33484.2 Da PI: 10.036

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	88.2	1.9e-27	38	106	2	70
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa 70 g+kdrhsk+ T +g+RdRR+Rls+++a +++ Lqd+LG+d++sk ++WLl++ak+ i +l+ + ++ PHT55175.1 38 FGGKDRHSKVLTVKGLRDRRIRLSVPTALQLYVLQDKLGLDQPSKVVDWLLNEAKHDIYQLPPHQMPPT 106 689***********************************************************9977766 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MTTGEVDPRD NVTKTPKKSS TSWTRFKDPR IVRVARAFGG KDRHSKVLTV KGLRDRRIRL 60 SVPTALQLYV LQDKLGLDQP SKVVDWLLNE AKHDIYQLPP HQMPPTGREG LPLNELLKLK 120 RPSNAFTGLR KDKDPQVLLE GVQRATQMMI DSDEEATKLV LPNLDLSNLL KGNSNSSIFN 180 FGLHQNDFFS RSAHSGGHHG VAIPQHEEIQ NFNIMATLPS TIYMPLSSQA LVYPPAGLPQ 240 YFSHPQKFAS SPEIFDPKDI GIQTLMSSCS ENPSSSNRYQ FFLSSTNNEE KKTKGMKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02150.1	1e-37	TCP family protein