PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT55153.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | B3 | ||||||||
Protein Properties | Length: 215aa MW: 24727.7 Da PI: 4.6501 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 44.9 | 2.1e-14 | 9 | 87 | 14 | 98 |
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 + +pk+fa+++ ++ ++ + le +sg++Wev++ + + g+++l+kGW++F++ + g f++F+++ rs +v +f+ PHT55153.1 9 CTQKIPKDFASRYCKNMLNP--VYLEVPSGEVWEVEV--EHSEGQMWLSKGWQDFCDYYSISCGHFLMFEYNARSHY--NVIIFD 87 5568*********5454444..***************..99999**************************9876555..676665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 215 aa Download sequence |
MKLSPDFLCT QKIPKDFASR YCKNMLNPVY LEVPSGEVWE VEVEHSEGQM WLSKGWQDFC 60 DYYSISCGHF LMFEYNARSH YNVIIFDLSA AEIEYPYSSA YGIRTIHCQG THHAPSTDQP 120 EPDDSVDILE GITRSQKLKE KNPDLVERLL DNKGHCPLGQ SSKRKRHDGD TEDDISIDMH 180 IKRMEVEKSQ EDIDSPSFTR EGQSEDLISI LLAMN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 1e-18 | B3 family protein |