PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT55150.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 507aa MW: 58031.4 Da PI: 9.6871

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT55150.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	37.2	5.4e-12	161	239	14	94
T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SEE..EE CS B3 14 grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr.sefelvv 94 +++p +fa+ g+ + k+++l +e+g++W++ i ++ r+++++GW eF n++ g ++ Fkl++ +++ v+ PHT55150.1 161 IFMTIPLSFAKGTGMT--NMKKMRLVNEKGNEWKLVDI-VHTRYRVLIKGGWAEFRTRNKIANGQTCRFKLIKGnGCGNNVL 239 4589****999877..5569********8874.4455579**********************996547776655 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MPPVFIKENK KMLAKTCLLK TNAVGLIWEA KIVRENYNYF ICDGDWPQFV VHHKLELGDI 60 LIFFLIDKST FQVLPYNQKS CKSFSGKGVF QELSSSSAEE HDVGIARKLK KIKMEPKESS 120 EEEKAEGGNG KKGPKKNRFS VVNLNSKDPY FEMVVRKTHS IFMTIPLSFA KGTGMTNMKK 180 MRLVNEKGNE WKLVDIVHTR YRVLIKGGWA EFRTRNKIAN GQTCRFKLIK GNGCGNNVLQ 240 MHCYSEQMNR SSELMHCFSK LMQCFDEMTQ CFTRIEKVTT ESQMHDVATT VGANNITSSS 300 RTNAPPMMAS AEKPGKFLGI DFKRQQQKMF FYLTTVCLQW FTSEDAPEEL QVIIHDLLAE 360 GLIVNDAFQV AAIVEKLPPL WKDFKNYLKH KRKEMTIEDL IVRFRIEEDN KAAERRMQLD 420 GKFSRMVDGF GSTRHVCANR ELFSLFSPAQ AEEMIYMANS ATAKVEGTGK IYLKMTSGKV 480 LTLNNILYVP ELRRNLIPVS LLDKNGF

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MPPVFIKENK KMLAKTCLLK TNAVGLIWEA KIVRENYNYF ICDGDWPQFV VHHKLELGDI  60
LIFFLIDKST FQVLPYNQKS CKSFSGKGVF QELSSSSAEE HDVGIARKLK KIKMEPKESS  120
EEEKAEGGNG KKGPKKNRFS VVNLNSKDPY FEMVVRKTHS IFMTIPLSFA KGTGMTNMKK  180
MRLVNEKGNE WKLVDIVHTR YRVLIKGGWA EFRTRNKIAN GQTCRFKLIK GNGCGNNVLQ  240
MHCYSEQMNR SSELMHCFSK LMQCFDEMTQ CFTRIEKVTT ESQMHDVATT VGANNITSSS  300
RTNAPPMMAS AEKPGKFLGI DFKRQQQKMF FYLTTVCLQW FTSEDAPEEL QVIIHDLLAE  360
GLIVNDAFQV AAIVEKLPPL WKDFKNYLKH KRKEMTIEDL IVRFRIEEDN KAAERRMQLD  420
GKFSRMVDGF GSTRHVCANR ELFSLFSPAQ AEEMIYMANS ATAKVEGTGK IYLKMTSGKV  480
LTLNNILYVP ELRRNLIPVS LLDKNGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G31690.1	3e-08	B3 family protein