PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT55149.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | B3 | ||||||||
Protein Properties | Length: 332aa MW: 37791.5 Da PI: 4.8469 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 41.1 | 3.1e-13 | 30 | 112 | 10 | 98 |
HHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 10 vlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +++++rl++p f +++ ++ ++ + le +sg++Wev + + + g+++l++GWk+F + + g f++F ++ rs f +v++f+ PHT55149.1 30 SHELCRLRIPEGFSSRYCKNMLNP--VFLEVPSGEVWEVDV--EHSEGHIWLAQGWKDFSDYYSISRGHFLIFGYNARSHF--NVTIFD 112 56789************5454444..***************..999999**************************999999..999987 PP | |||||||
2 | B3 | 53.9 | 3.3e-17 | 234 | 316 | 4 | 90 |
E-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS B3 4 vltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 + +s+vl+ + l++p kfa ++ +++ s l+l+ + sW+vk+i+ +k+ + t GWk Fv +n+Lk gD++v++++++++ PHT55149.1 234 FMHTSYVLRPHSLYIPLKFAMKYLMQN--SGNLVLRVPGRGSWSVKCIILRKDAK--VTCGWKAFVLDNKLKYGDVCVLEVINDTKL 316 5779*******************6663..447***************88777766..79*********************9887444 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 332 aa Download sequence |
MVNKFRRKIG EASSISNITQ PKFGKIIFSS HELCRLRIPE GFSSRYCKNM LNPVFLEVPS 60 GEVWEVDVEH SEGHIWLAQG WKDFSDYYSI SRGHFLIFGY NARSHFNVTI FDLSAAEVDY 120 PTAEIESDDS IDISDVVEHS SENLSRGPLI EEGERKRQEG EAEDDDLQTN VIEEEESQGN 180 VVSPEINEGY KEHEQQTKIV TSESESEAER DQEIAENYQR AKAFKSKNPF IISFMHTSYV 240 LRPHSLYIPL KFAMKYLMQN SGNLVLRVPG RGSWSVKCII LRKDAKVTCG WKAFVLDNKL 300 KYGDVCVLEV INDTKLSLIE VTIFPGVSDG TN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 3e-37 | B3 family protein |