PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55086.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 329aa    MW: 37004.9 Da    PI: 4.9751
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55086.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH38.52e-12163206654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  A++Y+k+L
  PHT55086.1 163 LMAERRRRKRLNDRLSMLRSIVPKiS------KMDRTSILGDAIDYMKEL 206
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MVLSDEDVLE ELLAPRRESW STFLSGSEVN DFSPNGWTFE SLPFYQNPEF IALNSSLLGL  60
LSPPTTTQSN NFHQCPDFTS PESYRVLDSS FTSPPDPLLE IQDEIAGIIP SDFHGLQEDL  120
NSFSTNNDVK VEEADSRIIG ICANVGQKKN KVRKVEGQPS KNLMAERRRR KRLNDRLSML  180
RSIVPKISKM DRTSILGDAI DYMKELLEKI HTLREDDNVK DEIKDIKFVG NFKELKPNEA  240
LVKKPPKFEV ERRNVDTRIE ICCAAKPGLL LSTVSTLEAI GLDLQQCVIS CFSDFSLQAS  300
CSEAREHRTI LSSEDVKQTL SKTAGYGGR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1166173ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.17e-80bHLH family protein