PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT55053.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 155aa MW: 17496.3 Da PI: 8.8826 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.2 | 4.1e-18 | 10 | 59 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+W+AeIr p+ + +r++lg+f+ ae+Aa a+++a+ +++g PHT55053.1 10 HYRGVRQRP-WGKWAAEIRNPK----KaARVWLGTFDRAEDAALAYDEAAVRFKG 59 7********.**********84....45**********************99877 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 155 aa Download sequence |
MLGSGSGRRH YRGVRQRPWG KWAAEIRNPK KAARVWLGTF DRAEDAALAY DEAAVRFKGS 60 KAKLNFPERL VQGQPQLLSQ DTSPQHNSHH FEEFNTASAT GISYPHLLQY AQLLSSNDAE 120 FPFFTSALYN NKQDGSTSNI LQQHDFPSQH DDFSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13330.1 | 1e-32 | ERF family protein |