PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT55009.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 852aa    MW: 96509.1 Da    PI: 9.2773
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT55009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B334.43.9e-11551311698
                 EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3  16 lvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                   +p +f+ ++g +      + le ++g  Wevkl  +++ g+ +l++GW++F +   +  g f++F+++g+s f  +v +f+
  PHT55009.1  55 KHIPDEFVMKYGAD--LRDLVFLEVPTGAIWEVKL--QNSNGMKWLKEGWNKFKEYYSIGCGYFLLFQYKGNSHF--FVFIFD 131
                 579********877..555899999**********..**********************************9988..777776 PP
2B3543e-17751847199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 f+  + p++v+++ +l +p +f++++  +  e++ + l+ ++gr W+ kl   ++s+  + ++GW++Fv  n Lke D++vF+l +++e  l v++fr+
  PHT55009.1 751 FIVSMQPAYVSQNFQLDIPVNFFKKYIRE--EETIINLRVSNGRIWRAKLFNIQSSCVKIQASGWRDFVLGNSLKEHDTCVFELFEDTEPVLDVTIFRA 847
                 778899********************544..4568***************778888888889*********************9988777788998885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 852 aa     Download sequence    
MKKNKNRKAN MVKRRDFLTC YLAMAFSFPF SQFLYVIGNM TAVSSAILHQ ILGLKHIPDE  60
FVMKYGADLR DLVFLEVPTG AIWEVKLQNS NGMKWLKEGW NKFKEYYSIG CGYFLLFQYK  120
GNSHFFVFIF DLSASEIEYP SGPNEDITPE KFVNLVGDAS HRKKTQKNAC DDDFLRNKTA  180
KVADRSYSER EKSVIQVSHP SCPPERQEPN RVKLEKPDVE EDLDCATQND KEKLLKLNME  240
KNLYCAADKG NGHCNEVLDP SASKMANTTK CTKRKYSISL EASGRSYPLR SKQVKLEQSK  300
GNGSPYSVKQ RSSTPVPCRG TQSERKESTE VQLEKANTEE DFCCAVQLEK ANTEEDLCCV  360
PKAKRVETNM EKLVKQGRQH NLYGEAYKFK GHCNEVPVVV ALASKVTTIN QHSKQKTITS  420
LDASICRYPL RSKQVKDVKT ENGDVEEHCS KIPVVDPSVI KKTTTNQHSK QKTTTTLDAS  480
ICRYPLRSKQ VKDVKTEIGD VEEHCSKIPV VDPLVIKKTT TNQHHEKKTS VSLDTSHCRY  540
PLRSQQLKEV KLGKPNAEED LLSVAQKAKM KKANNVKLEK GDVEECNKEM PVGDPSTTKK  600
KTTNRHHQKK TSFSLDTSHC RYPLRSKQLN EVKLGQWEAG GNIHNKLPKK TVAADSSYCK  660
TQNSGLPASS RSCKPIRVKL EKPDNLFCAA EKAEGKETIN VKLETGDMEV NLNSASYKGT  720
DSTASEMTRL GKKKMLPSEK HNWGNYCNPH FIVSMQPAYV SQNFQLDIPV NFFKKYIREE  780
ETIINLRVSN GRIWRAKLFN IQSSCVKIQA SGWRDFVLGN SLKEHDTCVF ELFEDTEPVL  840
DVTIFRAMTP AS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.15e-20B3 family protein