PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT54673.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | bHLH | ||||||||
Protein Properties | Length: 348aa MW: 39282.4 Da PI: 7.9322 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.6 | 2.6e-09 | 193 | 240 | 4 | 55 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +h+ +Er RR++i +++ L++l+P + +k Ka +L + ++Y++sLq PHT54673.1 193 SHSLAERARREKISKKMKYLQDLVPGC----NKVTGKAGMLDEIINYVQSLQ 240 8*************************9....677*****************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 348 aa Download sequence |
MLHCGEMSVL ERQRIVLERL YNHSKQQLSS LPQQDLAHFN NLIIRHMMSG GCVEENFTNF 60 DMFGGREHKG FAGSNFVTNN NCQEMARPSF STVSNSSITT VSPPPEKENY PSTVVTPREN 120 VVSTKKRKAE FYVEEDCKTK RPEGKTGEVH SEITEKSQRG VTGNDSKENS KTSEVQKPDY 180 IHVRARRGQA TDSHSLAERA RREKISKKMK YLQDLVPGCN KVTGKAGMLD EIINYVQSLQ 240 KQVEFLSMKL ATLNPRLDLI TDNFFTKDFP SYIATTFPPT VALPTLSEYN MIQHQQGSSG 300 DVAQMLPQRR DLMSFPEAFL GSSPLTVVQQ QQPTFEPDLQ SLFSVGFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18300.2 | 5e-57 | bHLH family protein |