PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT54666.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 241aa MW: 26505.8 Da PI: 7.8522 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 63.5 | 2.5e-20 | 135 | 169 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+nC tt+TplWR+gp+g+k+LCnaCG++y+k+++ PHT54666.1 135 CANCDTTSTPLWRNGPRGPKSLCNACGIRYKKEER 169 ********************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 241 aa Download sequence |
MNSCGSAYCH GGPCTCGLYY GQNNDTSAYS MFYSQYHQKD ENSLENMYSF ANSSPSSSSS 60 SVDCTLSLGT PSTRLSTNEN EKRVHDTHER RSSSYMSKCW NILQNKNHTT NKSSRGSSNA 120 NTNSSGADPL VARRCANCDT TSTPLWRNGP RGPKSLCNAC GIRYKKEERR ASAAAVATAN 180 GGGMDSSQHM INGSWVHHSQ AQKMPCYSSA YGNHEFRFTE DDDRDSDSAI SFWPFLASQH 240 C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G50870.1 | 2e-36 | GATA family protein |