PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT54246.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YB | ||||||||
Protein Properties | Length: 209aa MW: 22944.1 Da PI: 6.0082 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 171.6 | 9e-54 | 71 | 165 | 1 | 95 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqdr+lPian++rimkk lP+naki+kdak+tvqecvsefisf+tseasdkcq+ekrktingddl+wal+tlGfedy+eplk yl +yre ++ PHT54246.1 71 VREQDRYLPIANIGRIMKKGLPTNAKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLIWALTTLGFEDYIEPLKGYLIRYREGDT 165 69*****************************************************************************************9665 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MDCVHLTLPR PHYVGIHWVC CCCCLFNVVC LCFRILLLVL LSMAEVPASP GGGGASHESG 60 GGDEQSPQSN VREQDRYLPI ANIGRIMKKG LPTNAKIAKD AKDTVQECVS EFISFITSEA 120 SDKCQKEKRK TINGDDLIWA LTTLGFEDYI EPLKGYLIRY REGDTKGSVR AGDTSARKDI 180 VGGHLGPSSQ QFVYDGSFTQ DLDYGNSQM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53340.1 | 2e-67 | NF-YB family protein |