PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT54139.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

TCP

Protein Properties

Length: 269aa MW: 28092.4 Da PI: 10.3876

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT54139.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.4	2.4e-38	33	133	3	104
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaakskksq 101 +kk + +++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tgt++ +as++ ++s s+ +s+ +++++ ++ +k++q PHT54139.1 33 VKKPPVKDRHSKVDGRGRRIRMPIVCAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTVPASFS-TVSVSVRNSSTGISSSLSAPLDQKSQQ 130 7999****************************************************************777.444444444444554444444444444 PP TCP 102 ksa 104 +++ PHT54139.1 131 QQQ 133 443 PP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence
MSTSAEGNGA IIDPQRQQQQ QPSGVGTNGA LVVKKPPVKD RHSKVDGRGR RIRMPIVCAA 60 RVFQLTRELG HKSDGQTIEW LLRQAEPSII AATGTGTVPA SFSTVSVSVR NSSTGISSSL 120 SAPLDQKSQQ QQQLIPAPFI LGKRLRSDEE NLEHGNKDDV GAGAGTATAS VGPTAGFWAV 180 PARPDFGQIW SFAAAAPPEM MAPTSAAAAA AAAAALSSQS SRFFQQQMGE ASAARVGNYL 240 PMTQGHLNLL ASLSGPPQPS SGRRDDDGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	2e-71	TCP family protein