PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT54037.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 301aa    MW: 33579.5 Da    PI: 4.975
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT54037.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.41.8e-184289354
         AP2  3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkle 54
                y GVr+++ +gr++AeIrdp++   + r++lg+f+taeeAa a+++a+++++
  PHT54037.1 42 YLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAEEAALAYDRAARSMR 89
                88******.**********965...5***********************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDFINSSSSS STSKSTKPRK NIGATTQSVK QKAEEQQSSI RYLGVRRRPW GRYAAEIRDP  60
TTKERHWLGT FDTAEEAALA YDRAARSMRV NNKSNKPTRT NFVYSDMPHG YSVTCIVSPD  120
EEYQHHQQQI LVFGQAESAP APTVDCGAHF SHFSASNMNN VGGDSGGGGE FVLQQYYNPN  180
YSMHMEDNYR YDINNATSTE LPPLPEDITS SRNYYYLNDQ STQFPTTTIS EMGCSSSSSN  240
NGLLNEMIIG TNNEYQYGGS TITTTSSTTT TAGSFNYFGF DDCLQPLQDE PNNNSMGYWF  300
S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G13910.15e-31ERF family protein