PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT53972.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

G2-like

Protein Properties

Length: 303aa MW: 34037.9 Da PI: 9.0186

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT53972.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	104.1	8.3e-33	19	72	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtp+LH++Fv+a+e+LGG++kAtPk +l++m+v gLt++hvkSHLQ+YR+ PHT53972.1 19 PRLRWTPDLHHCFVHAIEKLGGQDKATPKLVLQMMDVRGLTISHVKSHLQMYRS 72 8****************************************************7 PP
2	Myb_DNA-binding	48.9	1.5e-15	20	71	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT++++ +v+a+++lGg t+k++ ++m g+t ++ks++q+y+ PHT53972.1 20 RLRWTPDLHHCFVHAIEKLGGQdkaTPKLVLQMMDvRGLTISHVKSHLQMYR 71 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 303 aa Download sequence
MGNCGRNGGV RQYIRSKVPR LRWTPDLHHC FVHAIEKLGG QDKATPKLVL QMMDVRGLTI 60 SHVKSHLQMY RSMKNDVNRQ AERMSTQPRK HQSLEDHDCH YQKQEKGVCV EQQKLLVYQH 120 YPSFSSSPME RSDSTQYFNS ILPTKRARIE VCSNQRIREA VSNQYNSRND YIEKNGVKGE 180 RAGFIWQQNS ETNRQTAHPL CNSSSTTTLF FNPLQRSNEV QESEFFKVTK THDSNAGGGG 240 GGGGEDNDEC GLSLSLSLHR PSTQRSNASS IISEIGETIS SYSAGSNVNQ QSVSVNLNLS 300 IAL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02060.1	1e-34	G2-like family protein