PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT53913.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | NF-YC | ||||||||
Protein Properties | Length: 312aa MW: 34693 Da PI: 8.2111 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 82.4 | 5.2e-26 | 133 | 204 | 30 | 101 |
NF-YC 30 lkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivprdel 101 + ++e v++++ eaP+l++k ce+f+ elt+rsw ++eenkrr l+k di++a++r +ifdf vdiv +de+ PHT53913.1 133 MIYNEGVSKVTVEAPMLFAKECEMFMQELTFRSWFNTEENKRRMLRKKDITKAIERIEIFDFQVDIVLKDEI 204 7789*****************************************************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 312 aa Download sequence |
MLYGAECWPV KNSHIQKLKV AEMRILLWMC ALTREDRVKN GINRAKVGVA SVKNKMREVR 60 LRWFGHVMRR GTDASVRSSL WTRLHLLVSS ASGTTGLGNS AADEGILGVT TQGNQGDERF 120 LEQQTSACSY QQMIYNEGVS KVTVEAPMLF AKECEMFMQE LTFRSWFNTE ENKRRMLRKK 180 DITKAIERIE IFDFQVDIVL KDEIREEGIG FGPSMLGSTS SGVQNFYPPI RQTAAPSEAR 240 QAAKDNTNAS RGRSGQWQAA EDNINASRGS SGRWQAAEDN INACGGNSGW WQDAEDNINA 300 SGGSSALHNV DG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 3e-33 | NF-YC family protein |