PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT53742.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | B3 | ||||||||
Protein Properties | Length: 601aa MW: 67289.2 Da PI: 8.7929 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 59.2 | 7.3e-19 | 26 | 116 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 ffkv+ d + ++ l++p kfa++ ++ ++++ led+sgr+W v++ +k++g+ +++GW eF +++gLk+g+f+vF+++ + f v++f + PHT53742.1 26 FFKVM--IDKSFLKVLYFPPKFARSVSHL--TDQKTYLEDSSGRRWMVRV--CKHDGSLAIKQGWPEFSSEHGLKVGEFLVFHYVPGKHF--IVQIFGT 116 89999..77777778**********9765..4568***************..*******************************9865777..9999875 PP | |||||||
2 | B3 | 32.1 | 2.1e-10 | 520 | 596 | 15 | 94 |
-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EE CS B3 15 rlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvv 94 l lp + +h ++ k++ + + l+ ++ r W v + +s+ vlt GWk+ v a gL+ g ++F+l++ ++e+ + PHT53742.1 520 FLELPESWR-KHlpKKAKQGRMIIFLRGPDKRIWPVFY--HSRSRFNVLTFGWKQVVAAYGLNPGNECLFQLVD--QRECIF 596 566777775.666866677889999999**********..999999*************************986..344445 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 601 aa Download sequence |
MERENKACDG CKNDCRLIHG KGVLSFFKVM IDKSFLKVLY FPPKFARSVS HLTDQKTYLE 60 DSSGRRWMVR VCKHDGSLAI KQGWPEFSSE HGLKVGEFLV FHYVPGKHFI VQIFGTSACE 120 KIKFCSDIGK GRKRARAYPE ATNAVELLQT TAIDSVKKKS KLSAALESEK ATYKPNIASF 180 AGNVDTNTEK GRSVHSAIHV DESFRVIDRN AQYDQTTTVG SVKKKSKLSA ALESEMVTNK 240 PNIANFAVNV DTDTEKGRSV HSAIHVDESF RVIDINAQYD QTTAVGSVKQ KSKLSAALES 300 EKVMYKPNNA NFAVNADTDT EKGRSVHSPI HVDESFCVID RNAQYDQEDD RLCLHLSSFE 360 MPAIKPLAEG ISSPLKGDNG NDNHVETNSR SQTKPNLNFE NKKLKSEASL SQLEAGITAT 420 NMVSRPAEDF PPLAEDIPPR GPKYRNSKEA FQFPREARVV KKEIEDVPTE AFFPARAIHG 480 GEYANGNQKV IKSEPADSGD APSLNAVNYS CLLEIDGRDF LELPESWRKH LPKKAKQGRM 540 IIFLRGPDKR IWPVFYHSRS RFNVLTFGWK QVVAAYGLNP GNECLFQLVD QRECIFDVRK 600 I |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 131 | 137 | GRKRARA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G53310.1 | 3e-10 | B3 family protein |