PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT53727.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

C2H2

Protein Properties

Length: 284aa MW: 32731.7 Da PI: 9.5173

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT53727.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.1	0.00058	118	141	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C++C+ksF+ L +H + H PHT53727.1 118 WRCGYCKKSFRAEKFLDQHFDNrH 141 58**********999999976655 PP

Sequence ? help Back to Top
Protein Sequence Length: 284 aa Download sequence
MKILRQIPAK NYSYTLLPSF VLIIVLSSSS ISATPSLSPS DQGTEKHATS PEQDKSHVHE 60 VHCSRERSRA AWKVIEEYLM PFVEREKYEL PRQCRLHPSN DIFRDQEEHK IHFDLNEWRC 120 GYCKKSFRAE KFLDQHFDNR HSNLLDTVHS KCLADVCGAL HCDLVMEFKS KKTKCNPAAA 180 ARNRHLCEGL ADKCFPANES PSATRLHELF LRQFCDAHTC SGGRKPFSKG GKKHTNRFYF 240 AASVLTLMLL PLFYLIVYLY QKEMKRGTQE LKRIAKVGRK AKPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G63280.1	1e-112	C2H2 family protein