PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53572.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family GRF
Protein Properties Length: 490aa    MW: 53400.2 Da    PI: 6.3772
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53572.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC702.8e-22134176244
         WRC   2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 
                  e+grC+RtDGKkWRCsr+v + +k+CErH+hrgr rsrk++e
  PHT53572.1 134 VEQGRCKRTDGKKWRCSRDVAPLQKYCERHMHRGRPRSRKHVE 176
                 589**************************************98 PP

2QLQ48.13.4e-1769103236
         QLQ   2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 
                 +FT+aQ+ +L++Q+++yKy+++   vPp+Ll+ i+
  PHT53572.1  69 PFTWAQWKELERQAMIYKYMVSATSVPPDLLLSIS 103
                 9******************************9985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 490 aa     Download sequence    
MMGHHHQDGG ANKMPCSSEH QNVYSDEASI VLPPVTAGGS AVVRTLQPFD ISTNNSQAAG  60
GMATTLGYPF TWAQWKELER QAMIYKYMVS ATSVPPDLLL SISTNSSGAS HGVFHATLAS  120
GSVQGQRYTN VRDVEQGRCK RTDGKKWRCS RDVAPLQKYC ERHMHRGRPR SRKHVEVHAD  180
VSNASDSKKT RRRPTPMVVP AVPTYAAGQI NSHSTKQPLR STYQQIQGPL LFHDETGENI  240
STDPSFNELH RSSGWMMEGD MVAQANAAQQ WQHLMDSSAG FSADGRTHPD LQHGYREEAL  300
DLLASRDLLS TEDVSVKQNG EFNFMINPES VSMGQQSLKE APISDLVNSW SNDNIYNNSN  360
DENKEASLWS SLGNISPSSL TLSIAMAAGD ALDEDMGLDS RFMNANQHKS WENSWAPFAP  420
GGPLAEALHP SSSYTSNGDS ISPAATTVSS PSGVLQKTLL SHSDGSVCNS PILAAPTNIT  480
PEMVKFLWPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53660.18e-33GRF family protein