PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53294.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 365aa    MW: 40765.5 Da    PI: 6.4575
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53294.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY92.53.1e-29146207159
                 ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                 ldDg++WrKYGqK++ g+++pr+YYrCt +   gC ++k+v+rs+edp+++e+tY+g+H+++
  PHT53294.1 146 LDDGFSWRKYGQKDILGAKHPRGYYRCTLRhvqGCLATKQVQRSDEDPTIFEVTYRGRHTCS 207
                 59**************************988889**************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MDNYGADNSN VEFNRIINEL TQGRDLVQQL QLHLNAPNYN SSASFENTRE ILLHNIQSKF  60
DKALSILQYN STTGDNSNSP LTHSTSPAIP VFGVSDSPRS SPPHSEDSDR DLESKDPHAA  120
RKRKSTTPRW TKQVQIHPGA PLEGTLDDGF SWRKYGQKDI LGAKHPRGYY RCTLRHVQGC  180
LATKQVQRSD EDPTIFEVTY RGRHTCSQGG GGGASASNVH PAPLPLVVTI PQNQEPNLGN  240
HEQYQLIPAP HQNSPEILLD FQKNLSISKD DFNFNTHHDH PNNVPYIPPY SNFPSSSSSH  300
LNTDHQDYTF VTNSSTIPIN NFVENYPPSS NNMSAGTSQM NNADYQFNSM GFESNFPYNY  360
QGFSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11070.16e-49WRKY family protein