PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53235.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family WRKY
Protein Properties Length: 336aa    MW: 38559.3 Da    PI: 5.8056
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53235.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY78.95.6e-25186244259
                 --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
        WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                 dD ++WrKYGqK +k+s+fpr+Y++C ++  C+++k++e+s +   ++ + Y+g Hnh+
  PHT53235.1 186 DDIWSWRKYGQKFIKDSPFPRNYFKCNTSeLCQARKQIEKSLKKDCFFLVAYSGMHNHD 244
                 8*************************77769***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MDDNNWDLGA VVRNCGINRP SSDITPNLGS ESLNFDDDDL NFLDRIFGVD NNNFDYIAPI  60
DFSISRQEKS YDQFDDIINP TTPVSIIANP FKITNQNDNQ QIYLPPIQPA QVSQQVFLSS  120
PSGVEARECV PTTTTTAVSH ECINLQQQLL MWDSTLTMRN PPIQIRKSKN QSIWTTYELF  180
QEELTDDIWS WRKYGQKFIK DSPFPRNYFK CNTSELCQAR KQIEKSLKKD CFFLVAYSGM  240
HNHDPPIIRR SLSGWNHSSK YKLPKGINII PKALKLNASP SSSKSGKRYR ASSTLEIEST  300
SRKKNKIIIE TMKNNVDEKE EENINEDVPK GFEELN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52830.13e-25WRKY family protein