PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT53111.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family HSF
Protein Properties Length: 326aa    MW: 36327.5 Da    PI: 4.6939
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT53111.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind117.48.4e-37261172102
                   HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS
  HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 
                   Fl+k+y+++ed++++++isw+e+g++f+v++++efa+++LpkyFkh+nf+SFvRQLn+YgF+kv  ++         weF ++sF++g+k+ll +i+
    PHT53111.1  26 FLTKTYQLIEDQSIDDVISWNEDGSTFIVWNPTEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFGNDSFRRGEKNLLIDIQ 113
                   9*****************************************************************99.........******************** PP

                   XXXX CS
  HSF_DNA-bind  99 rkks 102
                   r+k 
    PHT53111.1 114 RRKV 117
                   *986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 326 aa     Download sequence    
MTPQPDRNRG EAPAAGEMPR SVPTPFLTKT YQLIEDQSID DVISWNEDGS TFIVWNPTEF  60
ARDLLPKYFK HNNFSSFVRQ LNTYGFRKVV PDRWEFGNDS FRRGEKNLLI DIQRRKVATP  120
IVATPCAATT AVVTVVAPPP PPPAQPPLAV STTDSCEEQV VTSNSSAGST AELLGQNERL  180
RIENLQLNKE LNQMKKLCGN IYNMMSNYNA DCSTSGNNQS AESISPALKP LDLLRTEQAV  240
DESGRTVCDE ENRVEPEAEA RLFGFSIGMK RIREGEVAMA EHYQDLRLQQ PGVDMKSEPS  300
DQGSNGDNEE TSWLLHCGGR NQRTCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.15e-82HSF family protein