PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT52832.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

HSF

Protein Properties

Length: 360aa MW: 41377.4 Da PI: 4.9582

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT52832.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	115.9	2.6e-36	48	139	2	102
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+ye+++d+++++++sw+++g+sfvv+d++ f++ +Lp++Fkh+nf+SFvRQLn+YgF+k++ e+ weF+++ F kg+k+ll++ik PHT52832.1 48 FLTKTYEMVDDSTIDHVVSWNREGQSFVVWDPHAFSTMLLPRFFKHNNFSSFVRQLNTYGFRKIDPER---------WEFANEAFLKGNKQLLRNIK 135 9**************************************************************999.........**************** PP XXXX CS HSF_DNA-bind 99 rkks 102 r+k+ PHT52832.1 136 RRKT 139 97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MMNNNPLYSV KEEYPGSSSG GDGGEPPPPT MMTPQPMEGL HDIGPPPFLT KTYEMVDDST 60 IDHVVSWNRE GQSFVVWDPH AFSTMLLPRF FKHNNFSSFV RQLNTYGFRK IDPERWEFAN 120 EAFLKGNKQL LRNIKRRKTP NSQSLPTAQA LGPCVELGRF GFDGEVDRLR RDKHVLMMEL 180 VKLRQNQQNT RAYLRSLELR LQGTERKQQQ MMNFLARAMQ NPEFIQQIIQ QKGKRKEIEE 240 AITKKRQRPI DQGSSSSTLH VGGSSHSIKS EPLEFGETSG FQVSELEALA LEMQGFGRAR 300 RDQQEDMTER LEQFDYTDKE LDAGFWEELF NEEDVSENED GEEEGVNVLA ERLGFMDSSP

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MMNNNPLYSV KEEYPGSSSG GDGGEPPPPT MMTPQPMEGL HDIGPPPFLT KTYEMVDDST  60
IDHVVSWNRE GQSFVVWDPH AFSTMLLPRF FKHNNFSSFV RQLNTYGFRK IDPERWEFAN  120
EAFLKGNKQL LRNIKRRKTP NSQSLPTAQA LGPCVELGRF GFDGEVDRLR RDKHVLMMEL  180
VKLRQNQQNT RAYLRSLELR LQGTERKQQQ MMNFLARAMQ NPEFIQQIIQ QKGKRKEIEE  240
AITKKRQRPI DQGSSSSTLH VGGSSHSIKS EPLEFGETSG FQVSELEALA LEMQGFGRAR  300
RDQQEDMTER LEQFDYTDKE LDAGFWEELF NEEDVSENED GEEEGVNVLA ERLGFMDSSP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22830.1	1e-98	HSF family protein