PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | PHT52695.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 827aa MW: 95203 Da PI: 7.0244 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 87 | 2.8e-27 | 67 | 153 | 2 | 91 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY+eYAk++GF++++++s++sk+++e+++++f Cs++g + e+++ ++r+ + ++t+Cka+++vk+++dgkw ++++ ++HnHel p PHT52695.1 67 FYQEYAKSMGFTTSIKNSRRSKKSKEFIDAKFACSRYGVTPESDTG---SSRRPSLKKTDCKASMHVKRKRDGKWFIHEFIKKHNHELLP 153 9***************************************999877...7888899*******************************975 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 827 aa Download sequence |
MVDHGDVVQS NVQLTGDMVD AVDKACHSRD GGVSRSPKRN ITGVEENADV EPHDGIEFES 60 HEAAYAFYQE YAKSMGFTTS IKNSRRSKKS KEFIDAKFAC SRYGVTPESD TGSSRRPSLK 120 KTDCKASMHV KRKRDGKWFI HEFIKKHNHE LLPALAYHFR IHRNVKLAEK NNIDILHAVS 180 ERTRKMYVEM SRQCGGSQEI GLLANDLNYQ FDKGRCLSLE EGDAQVMLEY FMHIQKENPY 240 FFYAVDLNED QRLRNLFWID AKSRKDYVSI SDVVFFDTSY MKSNEKMPFA LFIGVNHHCQ 300 PMLLGCALVA DETKPTFVWL MKTWLRAMDG QAPKVIITDQ DKSLKEAIEN IFPCSHHCFA 360 LWHVLERIPE ILPHVVKQHE NFMEKFSKCI FKSATDEQFD LRWWKMVSRF ELQENEWVHT 420 LYEDRKKWVP AYMRGRFMAG MSAAQRSESV SSFFDKYIQK KISLKEFMRQ YGMILQNRYE 480 EEAVADFDTL HKQPALKSPS PWEKQMSTIY THAIFKKFQV EVLGVVGCHP KKEAENGENI 540 TFRVDDCEKD DNFMVTWNES RSDVSCSCLL FEYKGFLCRH AMIVLQMCGL SSIPSQFILK 600 RWTKDATNVL TFEGTERIQT RVQRYNDLCR RAIVLGEEGS LSEESYDIAF RVLDEALKNC 660 VNVNNRSSAL TECSSSAVGL RDLEEDTQGI HFTKTCRKKS TNKKRKVHSE PEAAIVEAED 720 SLQQMDNLTV GGMTLNGYYG THQNMQGLIQ LNLMEPPHDG YYVNQQNMQG LGHLNTVTPD 780 HDGFFGSQQS VPGLGHLDFR QPSFTYGLQD EPSLRGAQLH GNNARHA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G15090.1 | 0.0 | FAR1 family protein |