PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT52533.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ERF

Protein Properties

Length: 808aa MW: 90238.9 Da PI: 6.2652

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT52533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54	4.2e-17	53	102	2	55
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr+++ +g+WvAeIr+p++ r+r +lg+f tae+Aa+a+++a+ l+g PHT52533.1 53 KFRGVRQRS-WGKWVAEIREPRK---RTRRWLGTFATAEDAARAYDRAAIILYG 102 79**999.******954...5999****************988876 PP

Sequence ? help Back to Top
Protein Sequence Length: 808 aa Download sequence
MNGTSAGPHH PHPTQDFNPI NQEEKTITAV NDDTSTSNKR GKGKGGPDNN KFKFRGVRQR 60 SWGKWVAEIR EPRKRTRRWL GTFATAEDAA RAYDRAAIIL YGSRAQLNLQ PSGVTTSSAS 120 SSTSSRRSSS SSTTQTLRPL LPRPSGFDFS FSSSAHIPPI SPSTNVLAGG NYVPYEFYPA 180 VQYADMAQNP QQYVPCGDDV YNESATTKAW TVCSDSNPNP GHQQQADNNQ QYQPQQQQNC 240 LYDEINTLVG SVGPSLSLCS TQMVNAAPVV SDPVAAVGCP GYPVLWPNGD DNYPPADIWD 300 YDNMAPKIKE IESSPSKGTS AAAQLHPLLY KLTLQALSQS GAEDNDYGEE ESFKRDDPNA 360 NSSSVEELVK TFSIDRYPAW AFEAIPYLRQ QVNYQKEVSC PRILRWLSGK TDKNTKFLDL 420 FNPPKEAIVH SWLVLTNREL KMPFFLTLRS VQTLSDPKVI DGIKIELFGA TTITRKIILE 480 GGANDAPLIV FETTSHYDYD NNGCTDFSSD FAASSECSSC KCRDCKEKHD GVINSINALT 540 ASVKETTSKR GVIPSKRISY PDTPLEIKAA KRRRKDTSKA SSIIIKRQDC NASVFVDVTA 600 TAEEHNMTFD NPSTASKDKE KVELFSLGER RNYPFERYCQ QQREVSQKEE CLINIIKSFS 660 IPASLPWYLV DEVYIPINCG DEFHWVLAVI VLKERCIQVY DSMSRRRRSE PSSEIQKLAK 720 ILPTYLNMSG FLDQNVCTDW STIEAYRDKM DNPFDAQYVD GIAQQTIGSH KDWGPFIATY 780 AEYLSDGLQV PNDGLDIGLL RKRYATLL

Sequence ? help Back to Top

Protein Sequence Length: 808 aa Download sequence

MNGTSAGPHH PHPTQDFNPI NQEEKTITAV NDDTSTSNKR GKGKGGPDNN KFKFRGVRQR  60
SWGKWVAEIR EPRKRTRRWL GTFATAEDAA RAYDRAAIIL YGSRAQLNLQ PSGVTTSSAS  120
SSTSSRRSSS SSTTQTLRPL LPRPSGFDFS FSSSAHIPPI SPSTNVLAGG NYVPYEFYPA  180
VQYADMAQNP QQYVPCGDDV YNESATTKAW TVCSDSNPNP GHQQQADNNQ QYQPQQQQNC  240
LYDEINTLVG SVGPSLSLCS TQMVNAAPVV SDPVAAVGCP GYPVLWPNGD DNYPPADIWD  300
YDNMAPKIKE IESSPSKGTS AAAQLHPLLY KLTLQALSQS GAEDNDYGEE ESFKRDDPNA  360
NSSSVEELVK TFSIDRYPAW AFEAIPYLRQ QVNYQKEVSC PRILRWLSGK TDKNTKFLDL  420
FNPPKEAIVH SWLVLTNREL KMPFFLTLRS VQTLSDPKVI DGIKIELFGA TTITRKIILE  480
GGANDAPLIV FETTSHYDYD NNGCTDFSSD FAASSECSSC KCRDCKEKHD GVINSINALT  540
ASVKETTSKR GVIPSKRISY PDTPLEIKAA KRRRKDTSKA SSIIIKRQDC NASVFVDVTA  600
TAEEHNMTFD NPSTASKDKE KVELFSLGER RNYPFERYCQ QQREVSQKEE CLINIIKSFS  660
IPASLPWYLV DEVYIPINCG DEFHWVLAVI VLKERCIQVY DSMSRRRRSE PSSEIQKLAK  720
ILPTYLNMSG FLDQNVCTDW STIEAYRDKM DNPFDAQYVD GIAQQTIGSH KDWGPFIATY  780
AEYLSDGLQV PNDGLDIGLL RKRYATLL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40220.1	4e-27	ERF family protein