PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT52375.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | ARR-B | ||||||||
Protein Properties | Length: 659aa MW: 72564.1 Da PI: 7.2255 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 61.1 | 2.3e-19 | 208 | 251 | 1 | 45 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 kpr++W+ +LH++Fv av+qL G ekA+Pk+il+lm+v+gLt+e+ PHT52375.1 208 KPRVVWSIDLHKKFVTAVNQL-GLEKAVPKRILDLMNVEGLTREN 251 79*******************.********************986 PP | |||||||
2 | Myb_DNA-binding | 21.6 | 5.2e-07 | 210 | 250 | 1 | 38 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlk 38 r W+ ++++++v av+qlG + +k+I m+ +g+t++ PHT52375.1 210 RVVWSIDLHKKFVTAVNQLGLEkaVPKRILDLMNvEGLTRE 250 678********************************999985 PP | |||||||
3 | Response_reg | 83.7 | 5.8e-28 | 26 | 134 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vdD+p+ ++ll +l+k +y +v+++++++ al++lke++ +Dl++ D+ mp+mdG++ll+ r e +lp+i+++a+++++++ + + Ga PHT52375.1 26 VLAVDDDPICLKLLDGLLRKCQY-QVTTTSQARTALKMLKENKdrFDLVISDVHMPDMDGFKLLELVRLEM-DLPVIMLSANSDSKLVMKGITHGAC 120 799********************.***************998889*******************9988865.************************* PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l+Kp+ eel + PHT52375.1 121 DYLVKPVRLEELKN 134 ***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 659 aa Download sequence |
MTVEEIRGNM SGERENYDNF SVGMKVLAVD DDPICLKLLD GLLRKCQYQV TTTSQARTAL 60 KMLKENKDRF DLVISDVHMP DMDGFKLLEL VRLEMDLPVI MLSANSDSKL VMKGITHGAC 120 DYLVKPVRLE ELKNIWQHVI RRKEVEPKNW NKSNDQDKAN EGGVEGERGS QISGNADQSG 180 KVKKKRKYEE YESDENGNDD EDSATLKKPR VVWSIDLHKK FVTAVNQLGL EKAVPKRILD 240 LMNVEGLTRE NKFRLFLKKV NSAEAQQANM VAAALGGKDS AYIRMGSLDG LGGFRTLAGS 300 GRFGQGQASL SSYASGGMLG RLNSPAGVSL RNLASSPMLQ PNHGQNLSNN ALMKFNPNVP 360 SASQNANLFQ GIPASLEFDR LQQSKCATRM GELNPLVGSS NSAMSNVNNP TLLQVNSEQS 420 LTGAGIGNQT SLNITSLRSV AFNIGVVTGS SNFLDHDRYN ENWQNTIQPL KFQSSSFPLT 480 EPFSNSHLPQ RDNDTSTGPH LQNNPVDFST STIVSLPFEA SRGETQCRES SGGAVQIMNQ 540 STCQQWPDQN QHYSHNSNNI FGNLSSQVSS NGEMAYLTHP MDQNNDIFCR RVETSLTGRS 600 NGGSSTHMHH SNNNNNNKPS VFPPGGVWGG KMYAVHTSTS NEVERLFPID PRLKTQDPT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-111 | ARR-B family protein |