PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT52371.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

ARR-B

Protein Properties

Length: 529aa MW: 58415.3 Da PI: 7.7005

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT52371.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	61.8	1.4e-19	199	242	1	45
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtleh 45 kpr++W+ +LH++Fv av+qL G ekA+Pk+il+lm+v+gLt+e+ PHT52371.1 199 KPRVVWSIDLHKKFVTAVNQL-GLEKAVPKRILDLMNVEGLTREN 242 79*****************.******************986 PP
2	Myb_DNA-binding	22	3.9e-07	201	241	1	38
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlk 38 r W+ ++++++v av+qlG + +k+I m+ +g+t++ PHT52371.1 201 RVVWSIDLHKKFVTAVNQLGLEkaVPKRILDLMNvEGLTRE 241 678********************************999985 PP
3	Response_reg	80.2	6.7e-27	17	125	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 vl vdD+p+ ++ll +l+k +y +v+++++++ al++l+e++ +Dl++ D+ mp+mdG++ll+ e++lp+i+++a++++ ++ + + Ga PHT52371.1 17 VLAVDDDPISLKLLDGLLRKCQY-QVTTTSQARTALKMLRENKhrFDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDSRLVMKGITHGAC 111 799******************.***********776667***************87754.558******************** PP EEEESS--HHHHHH CS Response_reg 96 dflsKpfdpeelvk 109 d+l+Kp+ eel + PHT52371.1 112 DYLVKPVRLEELKN 125 *********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 529 aa Download sequence
MSGERENYDN FPVGMKVLAV DDDPISLKLL DGLLRKCQYQ VTTTSQARTA LKMLRENKHR 60 FDLVISDVHM PDMDGFKLLE LVGLEMDLPV IMLSANSDSR LVMKGITHGA CDYLVKPVRL 120 EELKNIWQHV IRRKKVEPKN WNKSNDQDKA NQGGVEGVRG SQLSGNADQN GKVKKKRKDE 180 EYESDENGND DEDCATQDKP RVVWSIDLHK KFVTAVNQLG LEKAVPKRIL DLMNVEGLTR 240 ENKFRLFLKK FNSAEAQQAN MVAAALGGKD SAYIRMGSLD GLGDFRTLAG SGRFGQGQAS 300 LSSYASGGML GRLNSPAGVT LRNLASSPML QPNHGQNLSN NALMKFNPNV PSASQNANLF 360 QGIPASLEFD QLQQSKCATR MGELNPLVGS SNSAMSNVNN PILLQVNSEQ SLTGAGIGNQ 420 TSLNITSLSS EAFNTGVVTG SSNFLDHDRY NENWQNTIQP LKFQSSSFPL TEHFSNSHLP 480 QRDNDTSTXK ERMDEQALEP GTDEIRGKHG SGHYTGGARH DRDLRKKYP

Sequence ? help Back to Top

Protein Sequence Length: 529 aa Download sequence

MSGERENYDN FPVGMKVLAV DDDPISLKLL DGLLRKCQYQ VTTTSQARTA LKMLRENKHR  60
FDLVISDVHM PDMDGFKLLE LVGLEMDLPV IMLSANSDSR LVMKGITHGA CDYLVKPVRL  120
EELKNIWQHV IRRKKVEPKN WNKSNDQDKA NQGGVEGVRG SQLSGNADQN GKVKKKRKDE  180
EYESDENGND DEDCATQDKP RVVWSIDLHK KFVTAVNQLG LEKAVPKRIL DLMNVEGLTR  240
ENKFRLFLKK FNSAEAQQAN MVAAALGGKD SAYIRMGSLD GLGDFRTLAG SGRFGQGQAS  300
LSSYASGGML GRLNSPAGVT LRNLASSPML QPNHGQNLSN NALMKFNPNV PSASQNANLF  360
QGIPASLEFD QLQQSKCATR MGELNPLVGS SNSAMSNVNN PILLQVNSEQ SLTGAGIGNQ  420
TSLNITSLSS EAFNTGVVTG SSNFLDHDRY NENWQNTIQP LKFQSSSFPL TEHFSNSHLP  480
QRDNDTSTXK ERMDEQALEP GTDEIRGKHG SGHYTGGARH DRDLRKKYP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G25180.1	1e-119	ARR-B family protein