PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT51992.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 426aa MW: 47945.5 Da PI: 9.169

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT51992.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	38.7	1.8e-12	271	363	1	84
EEEE-..-HHHHT.T-EE--HHH.HTT.........---....--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlks.grlvlpkkfaeeh.........ggkke..esktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f k lt+sdv ++ grl l ++ ++++ + +++++ +d+ g+ ++++++ +++ ++yvl + W++F ++++L+e+D v++ + PHT51992.1 271 FMKNLTKSDVDEHqGRLLLNNEDVKKNlspilnkkfE---YlvDGIEVKTYDPMGKYYKMRFKTWGNYKSYVLLGSWRHFIQQHELEENDCVTIWM 363 8999*****99899********997766652...0447889***********99*************************99753 PP

Sequence ? help Back to Top
Protein Sequence Length: 426 aa Download sequence
MVELEREDVQ AALLLSWLKY TPVTQEDVEK MKEIDVLVNN SKRKKLARIN NADAQLSKKA 60 KNLSRKSSGS AGKDSEVVKK TEILEAPEAQ LSKKAKNLSR KSCEVVGELD RKVVRIKKTE 120 NQETPEAALS KKAMNLSSGL MNLPRESSEV AKKIKKTENL EAPDAQLSKK AKNLSSGLMN 180 LARNSSGSAG KDSESDEKSK KNPVRIKKTE NQGTPKAALS KKAMNSYGNS NQILKRARVS 240 PLNSPEKFES LPALPPIECL RTLIGECSKP FMKNLTKSDV DEHQGRLLLN NEDVKKNLSP 300 ILNKKFEYLV DGIEVKTYDP MGKYYKMRFK TWGNYKSYVL LGSWRHFIQQ HELEENDCVT 360 IWMFKHSVSG EFCFALTWKK DEDDDEEEEE AAARVVGTDP DTFRSEDEEA QVVGSDGWHG 420 SRGIQE

Sequence ? help Back to Top

Protein Sequence Length: 426 aa Download sequence

MVELEREDVQ AALLLSWLKY TPVTQEDVEK MKEIDVLVNN SKRKKLARIN NADAQLSKKA  60
KNLSRKSSGS AGKDSEVVKK TEILEAPEAQ LSKKAKNLSR KSCEVVGELD RKVVRIKKTE  120
NQETPEAALS KKAMNLSSGL MNLPRESSEV AKKIKKTENL EAPDAQLSKK AKNLSSGLMN  180
LARNSSGSAG KDSESDEKSK KNPVRIKKTE NQGTPKAALS KKAMNSYGNS NQILKRARVS  240
PLNSPEKFES LPALPPIECL RTLIGECSKP FMKNLTKSDV DEHQGRLLLN NEDVKKNLSP  300
ILNKKFEYLV DGIEVKTYDP MGKYYKMRFK TWGNYKSYVL LGSWRHFIQQ HELEENDCVT  360
IWMFKHSVSG EFCFALTWKK DEDDDEEEEE AAARVVGTDP DTFRSEDEEA QVVGSDGWHG  420
SRGIQE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03170.1	5e-21	B3 family protein