PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT51555.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 483aa MW: 53921.2 Da PI: 6.0993

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT51555.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53.2	6.7e-17	34	81	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WTt Ed +l ++vk++G g+W+++ r g+ R++k+c++rw ++l PHT51555.1 34 KGPWTTTEDAILMEYVKKHGEGNWNAVQRNSGLMRCGKSCRLRWANHL 81 79******************************************9986 PP
2	Myb_DNA-binding	45.8	1.4e-14	87	130	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+++ +E+ l+v+++++lG++ W++ a+ ++ gRt++++k++w++ PHT51555.1 87 KGAFSIDEERLIVELHAKLGNK-WARMAAQLP-GRTDNEIKNYWNT 130 7899****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 483 aa Download sequence
MAPNGGGVNK NNNGTSIGRN HNGGGLGTRQ VLKKGPWTTT EDAILMEYVK KHGEGNWNAV 60 QRNSGLMRCG KSCRLRWANH LRPHLKKGAF SIDEERLIVE LHAKLGNKWA RMAAQLPGRT 120 DNEIKNYWNT RLKRRQRAGL PIYPQDIQPQ NYQQDQNQQH STNIPSPFDN NHQNSNYNNN 180 NSPLSLLDIF NPSTMKPSRN IIPHQYQFNN NNPSSSFLTN TNNINNQVKF FRDPRVSLSL 240 TLASSMKNSQ LPSMIAPVPN NFSQGYSSSI PVPPLQHNYP NFTTSTRPFS EISSNPNGLI 300 LGMGTEQRSI QLSMPETTTT TSSDHADNNY VVERGLSRGN SGLLEDLLEE SQTLTRGEKI 360 EENCNVDNED NKGKLVWEEY GLTEEAADAI LTEESTYNFA HADDNNATQS KHSEDSSSLN 420 SSSGITTKEA SLELGNQVDD DIMRFLDNFP LGVSVPDWCD DQQNTSNAQS FECDQIQLSK 480 SSS

Sequence ? help Back to Top

Protein Sequence Length: 483 aa Download sequence

MAPNGGGVNK NNNGTSIGRN HNGGGLGTRQ VLKKGPWTTT EDAILMEYVK KHGEGNWNAV  60
QRNSGLMRCG KSCRLRWANH LRPHLKKGAF SIDEERLIVE LHAKLGNKWA RMAAQLPGRT  120
DNEIKNYWNT RLKRRQRAGL PIYPQDIQPQ NYQQDQNQQH STNIPSPFDN NHQNSNYNNN  180
NSPLSLLDIF NPSTMKPSRN IIPHQYQFNN NNPSSSFLTN TNNINNQVKF FRDPRVSLSL  240
TLASSMKNSQ LPSMIAPVPN NFSQGYSSSI PVPPLQHNYP NFTTSTRPFS EISSNPNGLI  300
LGMGTEQRSI QLSMPETTTT TSSDHADNNY VVERGLSRGN SGLLEDLLEE SQTLTRGEKI  360
EENCNVDNED NKGKLVWEEY GLTEEAADAI LTEESTYNFA HADDNNATQS KHSEDSSSLN  420
SSSGITTKEA SLELGNQVDD DIMRFLDNFP LGVSVPDWCD DQQNTSNAQS FECDQIQLSK  480
SSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G32460.2	3e-68	MYB family protein