PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT51375.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family E2F/DP
Protein Properties Length: 402aa    MW: 44037.5 Da    PI: 6.442
Description E2F/DP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT51375.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1E2F_TDP81.76.3e-26142207171
     E2F_TDP   1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 
                 r+++sL+llt+kf++ll+++++g+++ln+ a+ L   +v   +RRiYDi+NVLe+++liek+ k++irwkg
  PHT51375.1 142 RYDNSLGLLTKKFINLLQEADDGTLDLNHSADVL---EV--AKRRIYDITNVLEGIGLIEKTTKSHIRWKG 207
                 689*******************************...99..****************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 402 aa     Download sequence    
MSTTAASDNV DLNLSLGAAA ATLHHNSPSA SALAAAASRS HRSLFSNIPR ICSESVSFSG  60
NPLASSTFLF APKNEIEKPG EYNCVYGAGK KSLAVNYSPL KQATSARTKQ PSKGKVSRDA  120
VSAAKGVNSD LLDNLNLGGH YRYDNSLGLL TKKFINLLQE ADDGTLDLNH SADVLEVAKR  180
RIYDITNVLE GIGLIEKTTK SHIRWKGFRS TKSRGLDNQV SRLKGEIAYL NAEDCRLDNC  240
IREKLEQIRT LESDMDSQKS LFLTEEDIMS LPHFRDKTVI AIKAPYASSI EVPDPCEDLD  300
LERQYRLVLR STTAPIDLFL LSKPGRQHED LTIKHEKPLD ALSAAEKTDD AYLSSVRPCS  360
LDSTASKLSG VHKIVPSHAS VDDDYWLLSE EEVSATTLWG AQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G47870.22e-78E2F/DP family protein