PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT51154.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

MYB

Protein Properties

Length: 264aa MW: 29395.5 Da PI: 8.1847

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT51154.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	59.7	6.4e-19	34	79	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd++l ++v+++G ++W++I++++ gR++k+c++rw + PHT51154.1 34 KGPWSAEEDKILTKLVERYGARNWSLISKYIK-GRSGKSCRLRWCNQ 79 79***************************9.*********985 PP
2	Myb_DNA-binding	56.1	8.3e-18	88	130	3	47
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++++ Ede ++ a++++G++ W+tIar ++ gRt++ +k++w++ PHT51154.1 88 PFSPSEDETILAAHAKYGNR-WATIARLLP-GRTDNAVKNHWNST 130 79****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 264 aa Download sequence
MDFFNRCSTS TSSSSESSSS ESTPRNDNKA DKIKGPWSAE EDKILTKLVE RYGARNWSLI 60 SKYIKGRSGK SCRLRWCNQL SPNVEHRPFS PSEDETILAA HAKYGNRWAT IARLLPGRTD 120 NAVKNHWNST LKRRYQQLLQ QQNSGQMVNG LEFGSGSGYG SGSGMEYMNV DESPKGNTNS 180 YATTMTTMTP CNYTSGVWRN NNNNYGGGEC DDPMTTLSLA PPGMAGEEMP ERKTESFPAG 240 FWDVMRDVIA KEVREYVAST GFPN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50060.1	1e-57	MYB family protein