PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT51123.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family B3
Protein Properties Length: 579aa    MW: 64471 Da    PI: 7.3984
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT51123.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.35.2e-1717991199
                HHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3 11 lksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99
                l+   l +p kf++++++    s t +l  +s +sW v l   +++++ ++ +GW +Fvk++ +++gD++vF+  ++ + +++v+vf++
  PHT51123.1 17 LNYEKLKVPSKFTKHIEER--ASGTAVLVGPSANSWHVDL--IQQDDGLFFHNGWASFVKDHCIEAGDSLVFR--DDGDLHFTVQVFDE 99
                5556799******877744..5669***************..99999**************************..44777789**9986 PP
2B353.25.4e-17252346198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE...EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliy.rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 f kv+++ + + s  l +p +fa+e+   +++++++ l +++g++W+v+ i  ++ + ++++ +GW +Fv++n+++ gD+++F+l+++ e   +v+v+r
  PHT51123.1 252 FTKVMKRFNISGSYTLHIPYQFATEYL--PNCKVKILLHNLKGKTWTVNSIPtTRVQTSHTFCGGWLSFVRENNVDLGDICIFELVRECEL--RVRVLR 346
                 677777777788889***********6..45999****************77566666699************************985555..888877 PP
3B348.31.8e-15469563198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 f+ ++++ +v+ s  l +p +f  eh   +++ ++++l +++g+ W+v+ i + k ++ +++ +GW+ Fv++n+++ gD+++F+l+g  + e++v+++ 
  PHT51123.1 469 FVRIMKKFNVSGSYTLKVPYRFSMEHL--PNCRTEIVLHNLKGECWTVNSIPTVKVQTlHTFCGGWSAFVRENDIQMGDICIFELIG--KYEMRVHICA 563
                 556677778888999*******99996..45889****************99888888999************************99..5667899985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 579 aa     Download sequence    
MCESRKPHFL VGFNPSLNYE KLKVPSKFTK HIEERASGTA VLVGPSANSW HVDLIQQDDG  60
LFFHNGWASF VKDHCIEAGD SLVFRDDGDL HFTVQVFDES SCEKEAAYNA DCSQGATNLY  120
NLALKKRDRG NSVLLDCIVE GVPKKMRSTQ NPSECTSSQD THELAFSKDG YTPEDAGRDY  180
VASFLDEMEN AGDALDNTVT IAVPSQAMVV FHNPESKAEV KIGSGTSEED MWLPAQEAEK  240
VARLFTSSFP SFTKVMKRFN ISGSYTLHIP YQFATEYLPN CKVKILLHNL KGKTWTVNSI  300
PTTRVQTSHT FCGGWLSFVR ENNVDLGDIC IFELVRECEL RVRVLRVERE GNGYSSKAVH  360
EGLAADCAKI SGSKSRKVGA NSNHCSQQVV KAMKYDKKGS DHDKGHHGNM LKNHQLHCQS  420
KSSSGDSAIR KPTSSQDKQG SFTKSCMSMK SVPEEKLAAE SFVSNFPRFV RIMKKFNVSG  480
SYTLKVPYRF SMEHLPNCRT EIVLHNLKGE CWTVNSIPTV KVQTLHTFCG GWSAFVREND  540
IQMGDICIFE LIGKYEMRVH ICANGVIADQ SAIVVALTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.17e-17B3 family protein