PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

PHT51057.1

Organism

Capsicum baccatum

Taxonomic ID

33114

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum

Family

Protein Properties

Length: 301aa MW: 33567.1 Da PI: 10.4522

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
PHT51057.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.2	6.4e-18	97	177	13	99
TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS B3 13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 +++ +pkkfa++ ++ + ++l+ +sg +W+v+l + +++ +l++GWkeFv a+ L+e D ++Fk++g+s+f v+vf++ PHT51057.1 97 HRNGAIPKKFANNLR--EKLGDSVSLTGPSGATWNVRL--TLIGDALFLKDGWKEFVGAHSLEEDDLLIFKYNGSSRF--DVSVFDR 177 44458****5444..457779***********..889999************************998999..9999997 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MSLVRVGAEI RVQAEVRVRV DLGLEVKGSR DKCDKGAYRL KVGFRNIRTL QGKSIYLVMI 60 LRKRRIGIAC VQETKWVGSK AKDVNGYKLW YSRSVRHRNG AIPKKFANNL REKLGDSVSL 120 TGPSGATWNV RLTLIGDALF LKDGWKEFVG AHSLEEDDLL IFKYNGSSRF DVSVFDRQSL 180 CEKEASCFVK KCERADVASR IRTKRHTPRE YSSRDVSEAP PTKKPKLAAT PTSEDTSRSS 240 SHDEYEPPAK KKTLASTSTS ADTNESSSNN ECEPPTEKKT TLASTSTSRT RSARANAKLL 300 S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G33280.1	7e-24	B3 family protein