PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT51044.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family C2H2
Protein Properties Length: 265aa    MW: 28190.3 Da    PI: 8.4109
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT51044.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H210.90.0015102124123
                 EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                 ykC+ Cgk F +   L  H  +H
  PHT51044.1 102 YKCSVCGKGFGSYQALGGHKASH 124
                 9*********9999998888777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MALEALNSPT GTPTPPPFQF ESNGQQLRSI ENWRKGKRSK RSRSMEHQPT EEEYLALCLI  60
MLARSGGSVN HQRSLPPPAP VMKLHAPSSS SAAEEEKEKM VYKCSVCGKG FGSYQALGGH  120
KASHRKLVPG GGNGGDDQST TSTTTNATGT TTSVNGNGNR SGRTHECSIC HKCFPTGQAL  180
GGHKRCHYDG GIGNGNANSG VSASVGVTSS EGVGSTVSHR DFDLNIPALP EFWLGFGSGE  240
DEVESPHPAK KSRLCLPPKY ELFQH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27730.15e-38C2H2 family protein