PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | PHT50981.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
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Family | GRF | ||||||||
Protein Properties | Length: 596aa MW: 64098 Da PI: 8.1245 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77.1 | 1.7e-24 | 203 | 247 | 1 | 45 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e PHT50981.1 203 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEG 247 79****************************************985 PP | |||||||
2 | QLQ | 61.8 | 1.9e-21 | 135 | 171 | 1 | 37 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKy+ an+P+Pp+Ll +i+k PHT50981.1 135 GPFTPSQWMELEHQALIYKYITANVPIPPYLLNPIRK 171 59*********************************86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 596 aa Download sequence |
MDFGVVVGGL DSGGGVICSD NTSGMFAETK QQKLLYGSVG FNKHERSSVV TSEDEWNNKD 60 TKLAKTTHDF SVSKPTMLFQ QQQMLSFAAP NNTQNHLTMS YYQHPSSGFA RNTPGCGSGA 120 LNGGNMHGLI AGVKGPFTPS QWMELEHQAL IYKYITANVP IPPYLLNPIR KALESAGFST 180 FTGLRPNALG WGAFHLGFSN SNDPEPGRCR RTDGKKWRCS RDAVADQKYC ERHMNRGRHR 240 SRKPVEGQTG NSASANTGAT TTTTTTSAKL MNMSSAASAA LASGGGAAAS SNSLNLSHHS 300 QLCNLQPAVT NPSTTSPYLE RSYTAKENFG ERYSDMKGST IVSPSVKEPQ YKEQNLYGVT 360 SRAEFGLVCA DSLINPLNKK SSLVNCRGFG NSDNISDQES KSQHHPLRQF MDDWPKNQSD 420 QSNVSWPDID LQSDPTQLSI SIPVVTSDFM SSTSSPANDK LTASSHRSRE HEATQMGLGI 480 GTIISEHNQR QGSWIPISWE SSMGGPLGEV LHSTNSSSGD CKNNSALNLM TEGWDRSPRM 540 GSSPTGVLQK SSFGSLSNSS AGSSPRAENS KTTNEGSSLC NGLLGTTIMN PTLPAM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22840.1 | 5e-58 | GRF family protein |