PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50887.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family bHLH
Protein Properties Length: 351aa    MW: 39233.1 Da    PI: 4.3283
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50887.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.81.4e-11185228654
                 HHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                  ++ErrRR+r+N++++ Lr+++Pk +      K++  +iL  +++Y+k+L
  PHT50887.1 185 LMAERRRRKRLNDRLSMLRSVVPKiS------KMDRTSILGDTIDYMKEL 228
                 589*********************66......****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MEYYNENSSL EELLSLRSDS WDTTSVVPME MSDFYNNVLN YDSSCFVDNN NIPLSCSTTS  60
NSFEGYSCNL SFDHQSLINS FYSPFCDELS PPELTDNTSS FPSQEDFSSI LDDEVGNYSF  120
QNLEMGNNNA NTNNNNVVIP CKLEEIQVCE GTTAAVGGTS FNIGLCPEIR KTKSKKIDGQ  180
PSKNLMAERR RRKRLNDRLS MLRSVVPKIS KMDRTSILGD TIDYMKELLE KINKLQEEME  240
LEPNQLSLMS IFKDVKPNEM LVRNSPKFDV ERRGVDTKVE ICCAGKPGLL LSTVTTLEAL  300
GLELQQCVIS SFSDFAMQAS CSEGMEQGGV VSSEDIKQAL FRNAGYGGRC L
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1188195ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.12e-87bHLH family protein