PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID PHT50379.1
Organism
Capsicum baccatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Capsiceae; Capsicum
Family ERF
Protein Properties Length: 449aa    MW: 48879.5 Da    PI: 6.187
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
PHT50379.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.62e-20210259255
         AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55 
                 +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f+tae Aa+a+++a+++++g
  PHT50379.1 210 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFDTAEAAARAYDEAALRFRG 259
                 7********.**********7.....337*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    
MCILKVANPG DSGEYDRIPS TAGGDDSETT TPTTTTEGIP QPYEQSQSFE EMLQQQIQQE  60
TEYLMSASET PMFTGYSQSR DMSAMVTALT HVVSGRRQGG EWGYRPDISG VTTSFGSGSI  120
YSGNSPSSSS SGSWAGQKRR RDQEESVTAE QAHRVYGGFG ESSSSVKPEE ATSMAAPSTA  180
ITTAAATTAT QTAPQPSEVA AEETGERKRR YRGVRQRPWG KWAAEIRDPH KAARVWLGTF  240
DTAEAAARAY DEAALRFRGN RAKLNFPENV RLVPQQQQQQ QPPPQSTTRI AISSALPASQ  300
FPLMSATAPT TPPSFFQSYN LPQHQNQPPL QQQQLLPSSE VARDYWEYSQ LLQNPIDFHG  360
QQSSLLEQML LASSMGVLHS HTFPSSSSSS LATSAASSTS SPAYPMMFSA QQSRFFQPQT  420
HQNQGGSSSS SNFPHPFWTS SGHYPPSSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.11e-24ERF family protein